PROJECT INFORMATION
GOLD Project ID
Gp0738234  
Project Name
Sediment microbial communities from Los Azufres geothermal field, Michoacan, Mexico - S4  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
Source Sample ID
PI Roberto Marin
Added By Roberto Marin on 2023-05-03
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Macrogen Inc (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Metagenome of sediment sample from a geothermal field  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Sediment archaeal communities from Los Azufres geothermal field, Michoacan, Mexico
Biosample Sediment microbial communities from Los Azufres geothermal field, Michoacan, Mexico - S4
Analysis Projects Sediment microbial communities from Los Azufres geothermal field, Michoacan, Mexico - S4
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Sediment microbial communities from Los Azufres geothermal field, Michoacan, Mexico - S4
Other Names (alias, synonyms, short names)
  
Sample Description
Thermoacidophilic sediment sample from the Los Azufres geothermal field  
SAMPLE TAXONOMY
NCBI Taxonomy ID 749907
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Sediment  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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