Studies
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56,336 |
|
Biosamples
|
196,971 |
|
Sequencing Projects
|
525,344 |
|
Analysis Projects
|
385,119 |
| Organisms | 484,224 |
| PROJECT INFORMATION | |
|---|---|
|
GOLD Project ID
|
Gp0703667
|
|
Project Name
|
Candidatus Sulfurimonas baltica GD2
|
|
Other Names
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|
Legacy GOLD ID
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| NCBI BioProject Name | Species of the genus Sulfurimonas are reported and isolated from terrestrial habitats and marine sediments and water columns with in redox transition environments. Here we report on the isolation of strain SoZ1T and GD2T from the pelagic Black and Baltic Seas redoxcline, respectively. |
|
NCBI BioProject Accession
|
PRJNA635557 |
|
NCBI Locus Tag
|
HUE88
|
|
NCBI BioSample Accession
|
SAMN15043543 |
|
Source Sample ID
|
|
| PI | Unknown |
| Added By | JGI automated process on 2023-01-20 |
| Last Modified By | Supratim Mukherjee on 2023-02-11 |
| Project Comments |
|
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Project Status
|
Complete and Published
|
|
Project Relevance
|
Environmental |
|
Sequencing Center
|
Leibniz Institute of Baltic Sea Research
(Germany)
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Collaborating Institute
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Funding Agency
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Project Description
|
Candidatus Sulfurimonas baltica GD2 genome sequencing
|
| Is JGI Project |
No
|
|
Project Information Visibility
|
Public |
| PROJECT TYPE | |
|
Specimen
|
Organism |
|
Nucleic Acid
|
DNA |
|
Sequencing Strategy
|
Whole Genome Sequencing
|
| EXTERNAL PROJECT LINKS | |
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JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Other Publications
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Ignored Publications
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Unassigned Publications
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| SRA Experiment |
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| PROJECT COMPOSITION | |
| Study |
Candidatus Sulfurimonas marisnigri SoZ1 |
| Organism |
Candidatus Sulfurimonas baltica GD2 |
| Analysis Projects |
Candidatus Sulfurimonas baltica GD2 |
| Number of Analysis Projects (AP) |
1 |
| Number of Derived Analyis Projects (DAP) |
0
|
| SEQUENCING INFORMATION | |
|---|---|
|
Sequencing Status
|
Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
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Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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|
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
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Sequencing Comments
|
|
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
|
PacBio RS II |
|
Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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| GC Percent |
33.8
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| Chromosome Count |
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| Plasmid Count |
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| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0659374 |
| Organism Name |
Candidatus Sulfurimonas baltica GD2
|
| Other names (alias, synonyms, short names, common names) |
|
| Organism Domain |
BACTERIAL
|
| Phylogeny |
CAMPYLOBACTEROTA
|
| Genus |
Sulfurimonas
|
| Genus Synonyms |
|
| Species |
Sulfurimonas Candidatus Sulfurimonas baltica
|
| Subspecies |
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| Species Synonyms |
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| Strain |
GD2
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| Strain Synonyms |
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| Serovar/Cultivar |
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| Culture Collection ID |
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| Type Strain |
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| Exemplar DOI |
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| Exemplar Name |
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| Taxon DOI |
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| Biosafety Level |
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| Organism Comments |
|
| Cultured |
Yes
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| Culture Type |
Isolate
|
| Organism Type |
Natural
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| Uncultured Type |
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| Commercial Strain |
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| Commercial Strain Comments |
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ORGANISM TAXONOMY
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|
| NCBI Taxonomy ID |
2740404 |
| NCBI Superkingdom |
Bacteria
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| NCBI Kingdom |
|
| NCBI Phylum |
Campylobacterota
|
| NCBI Class |
Epsilonproteobacteria
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| NCBI Order |
Campylobacterales
|
| NCBI Family |
Sulfurimonadaceae
|
| NCBI Genus |
Sulfurimonas
|
| NCBI Species |
Candidatus Sulfurimonas baltica
|
| ISOLATION CLASSIFICATION | |
| Ecosystem |
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| Ecosystem Category |
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| Ecosystem Type |
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| Ecosystem Subtype |
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| Specific Ecosystem |
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| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
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| Genbank 16S ID |
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| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
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| Cell Shape |
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| Motility |
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| Sporulation |
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| Temperature Range |
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| Salinity |
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| pH |
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| Cell Diameter |
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| Cell Length |
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| Color |
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| Gram Staining |
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| Biotic Relationships |
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| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Symbiont Name |
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| Symbiont Taxon ID |
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| Cell Arrangements |
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| Diseases |
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| Known Habitats |
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| Metabolisms |
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| Phenotypes |
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| Energy Sources |
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