PROJECT INFORMATION
GOLD Project ID
Gp0703319  
Project Name
Streptomyces sp. MBT65  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name The phylum Actinobacteria includes many morphologically complex mycelium-forming bacteria that are of great importance for biotechnology due to their ability to produce a large array of natural products, including antibiotics, anticancer agents and immunosuppressants. The rapid spread of multiple drug resistant pathogens and the discovery that whole genomes of filamentous actinomycetes are rich in biosynthetic gene clusters accounts for the renewed research focus on these organisms. As understanding of the genetics of filamentous actinomycetes increases a large number of biosynthetic gene clusters are being unveiled, offering new options for genome mining-based drug discovery. Sequencing and analyzing actinomycetes genomes from extreme environments such as Himalaya will give precious insights in understanding evolution of these peculiar organisms and is likely to reveal novel gene clusters for natural products.
NCBI BioProject Accession PRJNA233559
NCBI Locus Tag
JHN63  
NCBI BioSample Accession SAMN17175069
Source Sample ID
PI Unknown
Added By JGI automated process on 2023-01-20
Last Modified By Supratim Mukherjee on 2023-02-11
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center Institute of Biology, Leiden University (Netherlands)
Collaborating Institute
  
Funding Agency
  
Project Description
Streptomyces sp. MBT65 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications Microbiology (Reading, Engl.): 160(Pt 8):1714-25 Eliciting antibiotics active against the ESKAPE pathogens in a collection of actinomycetes isolated from mountain soils.
PubMed: 24794971 DOI: 10.1099/mic.0.078295-0
Antonie van Leeuwenhoek: 106(2):365-80 Analysis of novel kitasatosporae reveals significant evolutionary changes in conserved developmental genes between Kitasatospora and Streptomyces.
PubMed: 24958203 DOI: 10.1007/s10482-014-0209-1
SRA Experiment
  
PROJECT COMPOSITION
Study A variety of actinomycetes isolated from a Himalayan soil sample. Genome sequencing
Organism Streptomyces sp. MBT65
Analysis Projects Streptomyces sp. MBT65
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
70.2  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0659029
Organism Name
Streptomyces sp. MBT65  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOMYCETOTA  
Genus
Streptomyces  
Genus Synonyms
  
Species
Streptomyces sp. MBT65  
Subspecies
  
Species Synonyms
  
Strain
MBT65  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1488395
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinomycetota  
NCBI Class
Actinomycetes  
NCBI Order
Kitasatosporales  
NCBI Family
Streptomycetaceae  
NCBI Genus
Streptomyces  
NCBI Species
Streptomyces sp. MBT65  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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