PROJECT INFORMATION
GOLD Project ID
Gp0701168  
Project Name
Brasilonema sp. CT11  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Scytonematacean cyanobacteria have been identified as a rich source of bioactive secondary metabolites and novel natural products, yet the genome sequencing data in this group is still scarce. We have sequenced a strain of Brasilonema sp. to initiate a genome mining study and identify new compounds with antimicrobial and anti-tumour potential.
NCBI BioProject Accession PRJNA641777
NCBI Locus Tag
HW132  
NCBI BioSample Accession SAMN15366321
Source Sample ID
PI Unknown
Added By JGI automated process on 2023-01-20
Last Modified By Supratim Mukherjee on 2023-02-11
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Academy of Sciences of the Czech Republic (Czech Republic)
Collaborating Institute
  
Funding Agency
  
Project Description
Brasilonema sp. CT11 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Molecules (Basel, Switzerland): Discovery of Unusual Cyanobacterial Tryptophan-Containing Anabaenopeptins by MS/MS-Based Molecular Networking.
PubMed: 32825321 DOI: 10.3390/molecules25173786
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Brasilonema sp. CT11 genome sequencing
Organism Brasilonema sp. CT11
Analysis Projects Brasilonema sp. CT11
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
42.4  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0656907
Organism Name
Brasilonema sp. CT11  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CYANOBACTERIOTA  
Genus
Brasilonema  
Genus Synonyms
  
Species
Brasilonema sp. CT11  
Subspecies
  
Species Synonyms
  
Strain
CT11  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2748322
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Cyanobacteriota  
NCBI Class
Cyanophyceae  
NCBI Order
Nostocales  
NCBI Family
Scytonemataceae  
NCBI Genus
Brasilonema  
NCBI Species
Brasilonema sp. CT11  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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