Studies
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56,035 |
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Biosamples
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191,586 |
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Sequencing Projects
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515,842 |
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Analysis Projects
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381,622 |
| Organisms | 480,341 |
| PROJECT INFORMATION | |||||||||||||||||||
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GOLD Project ID
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Gp0700200
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Project Name
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Oceanobacillus luteolus AMY 52
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Other Names
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Legacy GOLD ID
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| NCBI BioProject Name | Whole genome sequencing of spacecraft associated microorganisms from cleanroom environments. Isolates originated from various Mars bound missions beginning with the Viking missions in the 1970s. All strains were isolated via the NASA standard spore assay. | ||||||||||||||||||
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NCBI BioProject Accession
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PRJNA832800 |
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NCBI Locus Tag
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M3210
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NCBI BioSample Accession
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SAMN28071796 |
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Source Sample ID
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| PI | Unknown | ||||||||||||||||||
| Added By | JGI automated process on 2023-01-20 | ||||||||||||||||||
| Last Modified By | Supratim Mukherjee on 2023-02-11 | ||||||||||||||||||
| Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Environmental |
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Sequencing Center
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Jet Propulsion Laboratory, California Institute of Technology
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Collaborating Institute
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Funding Agency
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Project Description
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Oceanobacillus luteolus AMY 52 genome sequencing
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| Is JGI Project |
No
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Project Information Visibility
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Public | ||||||||||||||||||
| PROJECT TYPE | |||||||||||||||||||
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Specimen
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Organism |
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Nucleic Acid
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DNA |
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Sequencing Strategy
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Whole Genome Sequencing
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| EXTERNAL PROJECT LINKS | |||||||||||||||||||
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JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Other Publications
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Ignored Publications
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Unassigned Publications
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| SRA Experiment |
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| PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Genome Encyclopedia of Spacecraft Associated Microbes |
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| Organism |
Oceanobacillus luteolus AMY 52 |
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| Analysis Projects |
Oceanobacillus luteolus AMY 52 |
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| Number of Analysis Projects (AP) |
1 |
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| Number of Derived Analyis Projects (DAP) |
0
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| SEQUENCING INFORMATION | |
|---|---|
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Sequencing Status
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Complete |
| Sequencing Quality (MIGS-31) |
Level 2: High-Quality Draft |
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Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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Illumina HiSeq |
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Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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| GC Percent |
38.9
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| Chromosome Count |
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| Plasmid Count |
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| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0655944 |
| Organism Name |
Oceanobacillus luteolus AMY 52
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| Other names (alias, synonyms, short names, common names) |
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| Organism Domain |
BACTERIAL
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| Phylogeny |
FIRMICUTES
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| Genus |
Oceanobacillus
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| Genus Synonyms |
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| Species |
Oceanobacillus luteolus
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| Subspecies |
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| Species Synonyms |
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| Strain |
AMY 52
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| Strain Synonyms |
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| Serovar/Cultivar |
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| Culture Collection ID |
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| Type Strain |
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| Exemplar DOI |
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| Exemplar Name |
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| Taxon DOI |
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| Biosafety Level |
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| Organism Comments |
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| Cultured |
Yes
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| Culture Type |
Isolate
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| Organism Type |
Natural
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| Uncultured Type |
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| Commercial Strain |
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| Commercial Strain Comments |
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ORGANISM TAXONOMY
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| NCBI Taxonomy ID |
1274358 |
| NCBI Superkingdom |
Bacteria
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| NCBI Kingdom |
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| NCBI Phylum |
Bacillota
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| NCBI Class |
Bacilli
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| NCBI Order |
Bacillales
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| NCBI Family |
Bacillaceae
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| NCBI Genus |
Oceanobacillus
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| NCBI Species |
Oceanobacillus luteolus
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| ISOLATION CLASSIFICATION | |
| Ecosystem |
Engineered
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| Ecosystem Category |
Built environment
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| Ecosystem Type |
Spacecraft Assembly Cleanrooms
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| Ecosystem Subtype |
Unclassified
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| Specific Ecosystem |
Unclassified
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| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
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| Genbank 16S ID |
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| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
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| Cell Shape |
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| Motility |
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| Sporulation |
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| Temperature Range |
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| Salinity |
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| pH |
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| Cell Diameter |
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| Cell Length |
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| Color |
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| Gram Staining |
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| Biotic Relationships |
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| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Symbiont Name |
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| Symbiont Taxon ID |
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| Cell Arrangements |
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| Diseases |
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| Known Habitats |
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| Metabolisms |
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| Phenotypes |
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| Energy Sources |
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