PROJECT INFORMATION
GOLD Project ID
Gp0696237  
Project Name
Synechococcus sp. XM24 and associated heterotrophic bacteria co-culture viral communities from coastal seawaters near Xiamen Island, China - V20_3R2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Virus-mediated Synechococcus lysis impacts on Synechococcus co-culture system
NCBI BioProject Accession PRJNA573987
NCBI Locus Tag
  
NCBI BioSample Accession SAMN12837774
Source Sample ID
PI Unknown
Added By JGI automated process on 2022-12-14
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Xiamen University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Synechococcus sp. XM24 and associated heterotrophic bacteria co-culture viral communities from coastal seawaters near Xiamen Island, China  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX6898359  (Link to NCBI )
Experiment Title metagenomic sequencing of bacteria: Microbial community in Synechococcus co-culture
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name V20_3R2
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Synechococcus sp. XM24 and associated heterotrophic bacteria co-culture viral communities from coastal seawaters near Xiamen Island, China
Biosample Synechococcus sp. XM24 and associated heterotrophic bacteria co-culture viral communities from coastal seawaters near Xiamen Island, China - V20_3R2
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Synechococcus sp. XM24 and associated heterotrophic bacteria co-culture viral communities from coastal seawaters near Xiamen Island, China - V20_3R2
Other Names (alias, synonyms, short names)
  
Sample Description
Synechococcus sp. XM24 and associated heterotrophic bacteria co-culture viral communities from coastal seawaters near Xiamen Island, China  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1169740
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Microbial  
Ecosystem Type
Bacteria  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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