PROJECT INFORMATION
GOLD Project ID
Gp0666173  
Project Name
Barros Negros  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI virginia marcelino
Added By virginia marcelino on 2022-08-03
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Macrogen (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Taxonomic composition and metabolic potential of a microbial mat developing in Barros Negros lake  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome - Cell Enrichment  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Andean microbial ecosystems in Salar de Atacama, Chile
Biosample Barros Negros
Analysis Projects Barros Negros
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Barros Negros
Other Names (alias, synonyms, short names)
bn  
Sample Description
microbial mat sample taken from BarrosNegros lake  
SAMPLE TAXONOMY
NCBI Taxonomy ID 904678
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Non-marine Saline and Alkaline  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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