PROJECT INFORMATION
GOLD Project ID
Gp0661966  
Project Name
Bats-associated viral communities from Sedon and Wutao counties, Myanmar - Myanmar Bats  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Chiroptera Virome
NCBI BioProject Accession PRJNA171017
NCBI Locus Tag
  
NCBI BioSample Accession SAMN01758796
PI Unknown
Added By JGI automated process on 2022-07-14
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center Peking Union Medical College (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Bats-associated viral communities from Sedon and Wutao counties, Myanmar; the pool consistes of 853 bats comprising Miniopterus fuliginosus (M. fuliginosus), Hipposideros armiger (H. armiger), Rhinolophus ferrumequinum (R. ferrumequinum), Myotis chinensis (M. chinensis), Megaderma lyra (M. lyra) and Hipposideros fulvus (H. fulvus)  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX191936  (Link to NCBI )
Experiment Title High-throughput Sequencing with the platform of illumina GA II
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Layout SINGLE
Library Instrument ILLUMINA_GENOME_ANALYZER_II
PROJECT COMPOSITION
Study Bats-associated viral communities from Sedon and Wutao counties, Myanmar
Biosample Bats-associated viral communities from Sedon and Wutao counties, Myanmar - Myanmar Bats
Analysis Projects Bats-associated viral communities from Sedon and Wutao counties, Myanmar - Myanmar Bats
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina GAII
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Bats-associated viral communities from Sedon and Wutao counties, Myanmar - Myanmar Bats
Other Names (alias, synonyms, short names)
  
Sample Description
Bats-associated viral communities from Sedon and Wutao counties, Myanmar; the pool consistes of 853 bats comprising Miniopterus fuliginosus (M. fuliginosus), Hipposideros armiger (H. armiger), Rhinolophus ferrumequinum (R. ferrumequinum), Myotis chinensis (M. chinensis), Megaderma lyra (M. lyra) and Hipposideros fulvus (H. fulvus)  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1213622
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Multiple systems  
Ecosystem Subtype
Multiple organs  
Specific Ecosystem
Pooled tissues  

 

 

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