PROJECT INFORMATION
GOLD Project ID
Gp0661790  
Project Name
Fox feces viral communities from central Croatia - 55594  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Vulpes vulpes fecal viral Metagenome
NCBI BioProject Accession PRJNA270313
NCBI Locus Tag
  
NCBI BioSample Accession SAMN03430618
PI Unknown
Added By JGI automated process on 2022-07-14
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center Croatian Veterinary Institute, Zagreb
Collaborating Institute
  
Funding Agency
  
Project Description
Fox feces viral communities from central Croatia  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX960479  (Link to NCBI )
Experiment Title Viral metagenomic of fox feces revealed novel circovirus of Canidae: Sample 55594
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection unspecified
Library Name 55594
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Fox feces viral communities from central Croatia
Biosample Fox feces viral communities from central Croatia - 55594
Analysis Projects Fox feces viral communities from central Croatia - 55594
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Fox feces viral communities from central Croatia - 55594
Other Names (alias, synonyms, short names)
  
Sample Description
Fox feces viral communities from central Croatia  
SAMPLE TAXONOMY
NCBI Taxonomy ID 749906
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  

 

 

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