PROJECT INFORMATION
GOLD Project ID
Gp0653652  
Project Name
Nanohalobium constans LC1Nh  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Nanohalobium constans LC1Nh
NCBI BioProject Accession PRJNA531595
NCBI Locus Tag
LC1Nh  
NCBI BioSample Accession SAMN11370769
PI Unknown
Added By JGI automated process on 2022-06-29
Last Modified By JGI automated process on 2022-07-05
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center C.N.R. - Institute for Biological Resources and Marine Biotechnology (IRBIM)
Collaborating Institute
  
Funding Agency
  
Project Description
Nanohalobium constans LC1Nh genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Proceedings of the National Academy of Sciences of the United States of America 117(33):20223-20234 Symbiosis between nanohaloarchaeon and haloarchaeon is based on utilization of different polysaccharides.

Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Nanohalobium constans LC1Nh genome sequencing
Organism Nanohalobium constans LC1Nh
Analysis Projects Nanohalobium constans LC1Nh
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0636045
Organism Name
Nanohalobium constans LC1Nh  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
NANOHALOARCHAEOTA  
Genus
Nanohalobium  
Genus Synonyms
  
Species
Nanohalobium constans  
Subspecies
  
Species Synonyms
  
Strain
LC1Nh  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2565781
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Candidatus Nanohaloarchaeota  
NCBI Class
Candidatus Nanohalobia  
NCBI Order
Candidatus Nanohalobiales  
NCBI Family
Candidatus Nanohalobiaceae  
NCBI Genus
Candidatus Nanohalobium  
NCBI Species
Candidatus Nanohalobium constans  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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