PROJECT INFORMATION
GOLD Project ID
Gp0653635  
Project Name
Schlegelella thermodepolymerans DSM 15344  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Schlegelella thermodepolymerans DSM 15344
NCBI BioProject Accession PRJNA674774
NCBI Locus Tag
IS481  
NCBI BioSample Accession SAMN16675030
PI Unknown
Added By JGI automated process on 2022-06-29
Last Modified By JGI automated process on 2022-07-05
Project Comments
  
Project Status
Complete and Published  
Project Relevance Industrial
Sequencing Center Brno University of Technology
Collaborating Institute
  
Funding Agency
  
Project Description
Schlegelella thermodepolymerans DSM 15344 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX9639857  (Link to NCBI )
Experiment Title WGS Illumina: Schlegelella thedmodepolymerans DSM 15344
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name lib_1
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX9639858  (Link to NCBI )
Experiment Title WGS ONT: Schlegelella thedmodepolymerans DSM 15344
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name lib_2
Library Layout SINGLE
Library Instrument MIN_ION
PROJECT COMPOSITION
Study Schlegelella thermodepolymerans DSM 15344 genome sequencing
Organism Schlegelella thermodepolymerans DSM 15344
Analysis Projects Schlegelella thermodepolymerans DSM 15344
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Oxford Nanopore MinION; Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0026890
Organism Name
Schlegelella thermodepolymerans DSM 15344  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-BETA  
Genus
Schlegelella  
Genus Synonyms
  
Species
Schlegelella thermodepolymerans  
Subspecies
  
Species Synonyms
  
Strain
DSM 15344  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 15344  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.1854  
Exemplar Name
Schlegelella thermodepolymerans  
Taxon DOI
10.1601/tx.1854  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 215580
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Betaproteobacteria  
NCBI Order
Burkholderiales  
NCBI Family
Sphaerotilaceae  
NCBI Genus
Schlegelella  
NCBI Species
Schlegelella thermodepolymerans  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Activated Sludge  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sludge
Wastewater
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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