PROJECT INFORMATION
GOLD Project ID
Gp0646022  
Project Name
Paraphaeosphaeria minitans Conio (IMI134523)  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject Accession PRJNA588476
NCBI Locus Tag
PMIN01  
NCBI BioSample Accession SAMN13245827
Source Sample ID
PI Unknown
Added By JGI automated process on 2022-05-09
Last Modified By JGI automated process on 2022-05-16
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center University of Bedfordshire (UK)
Collaborating Institute
  
Funding Agency
  
Project Description
Paraphaeosphaeria minitans Conio (IMI134523) genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications Molecular plant-microbe interactions : MPMI: 34(2):222-225 Conio (IMI 134523).
PubMed: 33118857 DOI: 10.1094/MPMI-05-20-0124-A
SRA Experiment
 
SRA Experiment Id SRX7423215  (Link to NCBI )
Experiment Title gDNA of Paraconiothyrium minitans isolate Conio: PacBio1
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Conio_PacBio
Library Layout SINGLE
Library Instrument SEQUEL_II
 
SRA Experiment Id SRX7423217  (Link to NCBI )
Experiment Title gDNA of Paraconiothyrium minitans isolate Conio: MiSeq2
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Conio_MiSeq2
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX7423216  (Link to NCBI )
Experiment Title gDNA of Paraconiothyrium minitans isolate Conio: MiSeq1
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Conio_MiSeq1
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Endocarpon pusillum EPUS1.4 genome sequencing
Organism Paraphaeosphaeria minitans Conio (IMI134523)
Analysis Projects Paraphaeosphaeria minitans Conio (IMI134523)
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio Sequel; Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0632186
Organism Name
Paraphaeosphaeria minitans Conio (IMI134523)  
Other names (alias, synonyms, short names, common names)
Coniothyrium minitans  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Paraphaeosphaeria  
Genus Synonyms
  
Species
Paraphaeosphaeria minitans  
Subspecies
  
Species Synonyms
  
Strain
Conio (IMI134523)  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 565426
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Dothideomycetes  
NCBI Order
Pleosporales  
NCBI Family
Didymosphaeriaceae  
NCBI Genus
Paraphaeosphaeria  
NCBI Species
Paraphaeosphaeria minitans  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Fungi  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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