PROJECT INFORMATION
GOLD Project ID
Gp0642800  
Project Name
Wastewater microbial communities from WWTP in Medellin, Colombia - L4  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Raw sequence reads
NCBI BioProject Accession PRJNA648659
NCBI Locus Tag
  
NCBI BioSample Accession SAMN15681558
PI
Added By JGI automated process on 2022-05-02
Last Modified By Supratim Mukherjee on 2022-05-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Antioquia (Colombia)
Collaborating Institute
  
Funding Agency
  
Project Description
Wastewater microbial communities from WWTP in Medellin, Colombia  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX8856232  (Link to NCBI )
Experiment Title wastewater_16
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name LS10
Library Layout PAIRED
Library Instrument ILLUMINA_NOVA_SEQ_6000
PROJECT COMPOSITION
Study Wastewater microbial communities from WWTP in Medellin, Colombia
Biosample Wastewater microbial communities from WWTP in Medellin, Colombia - L4
Analysis Projects Wastewater microbial communities from WWTP in Medellin, Colombia - L4
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) ILLUMINA_NOVA_SEQ_6000
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Wastewater microbial communities from WWTP in Medellin, Colombia - L4
Other Names (alias, synonyms, short names)
  
Sample Description
Wastewater microbial communities from WWTP in Medellin, Colombia  
SAMPLE TAXONOMY
NCBI Taxonomy ID 527639
GOLD CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
WWTP  
Ecosystem Type
Wastewater  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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