PROJECT INFORMATION
GOLD Project ID
Gp0629761  
Project Name
Metatranscriptome of soil microbial communities from hyphal compartment of plant chamber, Beijing, China - AM-1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Vermicompost assisted arbuscular mycorrhizal fungi to transfer 15N from crop residues to lettuce by regulating soil bacterial community
NCBI BioProject Accession PRJNA657700
NCBI Locus Tag
  
NCBI BioSample Accession SAMN15835071
PI Unknown
Added By JGI automated process on 2022-04-28
Last Modified By Supratim Mukherjee on 2022-05-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center China Agricultural University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Metatranscriptome of soil amended with dried 15N-labelled wheat straw microbial communities in hyphal compartment; with arbuscular mycorrhizal fungi hyphae  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX8958383  (Link to NCBI )
Experiment Title Soil bacterial community in hyphal compartment with hyphae
Exp Library Strategy RNA_SEQ
Library Source METAGENOMIC
Library Selection PCR
Library Name library_5
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Soil microbial communities from hyphal compartment of plant chamber, Beijing, China
Biosample Soil microbial communities from hyphal compartment of plant chamber, Beijing, China - AM-1
Analysis Projects Metatranscriptome of soil microbial communities from hyphal compartment of plant chamber, Beijing, China - AM-1
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Soil microbial communities from hyphal compartment of plant chamber, Beijing, China - AM-1
Other Names (alias, synonyms, short names)
  
Sample Description
Soil amended with dried 15N-labelled wheat straw microbial communities in hyphal compartment; with arbuscular mycorrhizal fungi hyphae  
SAMPLE TAXONOMY
NCBI Taxonomy ID 410658
GOLD CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Artificial ecosystem  
Ecosystem Type
Plant growth chamber  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?