PROJECT INFORMATION
GOLD Project ID
Gp0610793  
Project Name
Methanogenium marinum DSM 15558  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome of Methanogenium marinum DSM 15558
NCBI BioProject Accession PRJNA796146
NCBI Locus Tag
L0665  
NCBI BioSample Accession SAMN24813622
PI Sheng-Chung Chen
Added By Sheng-Chung Chen on 2022-01-11
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Genomics BioSci & Tech Co., Ltd..
Collaborating Institute
  
Funding Agency
  
Project Description
Exploring the methanogen diversity in various environments  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of Methanogenium marinum DSM 15558
Organism Methanogenium marinum DSM 15558
Analysis Projects Methanogenium marinum DSM 15558
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio Sequel
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0026293
Organism Name
Methanogenium marinum DSM 15558  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOMICROBIA  
Genus
Methanogenium  
Genus Synonyms
  
Species
Methanogenium marinum  
Subspecies
  
Species Synonyms
  
Strain
DSM 15558  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 15558  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.198  
Exemplar Name
Methanogenium marinum  
Taxon DOI
10.1601/tx.198  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 348610
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanomicrobia  
NCBI Order
Methanomicrobiales  
NCBI Family
Methanomicrobiaceae  
NCBI Genus
Methanogenium  
NCBI Species
Methanogenium marinum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Oceanic  
Specific Ecosystem
Sediment  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID DQ177344
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Sediment
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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