PROJECT INFORMATION
GOLD Project ID
Gp0607922  
Project Name
Coccidioides posadasii str. Silveira  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Coccidioides posadasii Silveira
NCBI BioProject Accession PRJNA494320
NCBI Locus Tag
D8B26  
NCBI BioSample Accession SAMN00004989
PI
Added By JGI automated process on 2021-12-23
Last Modified By Supratim Mukherjee on 2022-01-05
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center Northern Arizona University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Coccidioides posadasii str. Silveira genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications Genome research 20(7):938-46 Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control.

SRA Experiment
  
PROJECT COMPOSITION
Study Coccidioides posadasii str. Silveira genome sequencing
Organism Coccidioides posadasii str. Silveira
Analysis Projects Coccidioides posadasii str. Silveira
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
PacBio Sequel
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0593977
Organism Name
Coccidioides posadasii str. Silveira  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Coccidioides  
Genus Synonyms
  
Species
Coccidioides posadasii  
Subspecies
  
Species Synonyms
  
Strain
Silveira  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 443226
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Eurotiomycetes  
NCBI Order
Onygenales  
NCBI Family
Onygenaceae  
NCBI Genus
Coccidioides  
NCBI Species
Coccidioides posadasii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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