PROJECT INFORMATION
GOLD Project ID
Gp0592896  
Project Name
Acanthopleuribacter pedis KCTC 12899  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Acanthopleuribacter pedis strain: KCTC 12899 Genome sequencing and assembly
NCBI BioProject Accession PRJNA713899
NCBI Locus Tag
  
NCBI BioSample Accession SAMN18274866
PI Galina Ovchinnikova
Added By Galina Ovchinnikova on 2021-10-18
Last Modified By Galina Ovchinnikova on 2021-10-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Guangxi University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Acanthopleuribacter pedis strain: KCTC 12899 Genome sequencing and assembly  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Acanthopleuribacter pedis KCTC 12899 Genome sequencing
Organism Acanthopleuribacter pedis FYK2218
Analysis Projects Acanthopleuribacter pedis KCTC 12899
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0030476
Organism Name
Acanthopleuribacter pedis FYK2218  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACIDOBACTERIA  
Genus
Acanthopleuribacter  
Genus Synonyms
  
Species
Acanthopleuribacter pedis  
Subspecies
  
Species Synonyms
  
Strain
FYK2218  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KCTC 12899  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.13683  
Exemplar Name
Acanthopleuribacter pedis  
Taxon DOI
10.1601/tx.13683  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 442870
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Acidobacteria  
NCBI Class
Holophagae  
NCBI Order
Acanthopleuribacterales  
NCBI Family
Acanthopleuribacteraceae  
NCBI Genus
Acanthopleuribacter  
NCBI Species
Acanthopleuribacter pedis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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