PROJECT INFORMATION
GOLD Project ID
Gp0586340  
Project Name
Stony coral tissue microbial communities from Marine Reserve of Tabarca, Spain - MX20_1_2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Oculina patagonica metagenomes
NCBI BioProject ID 612159
NCBI BioProject Accession PRJNA612159
NCBI Locus Tag
  
NCBI BioSample Accession SAMN14363903
PI
Added By JGI automated process on 2021-07-28
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center University of Alicante (Spain)
Collaborating Institute
  
Funding Agency
  
Project Description
Stony coral tissue microbial communities from Marine Reserve of Tabarca, Spain; In the presence of a Vibrio coculture growing inside a dialysis membrane under 20C for 10 days  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX7901998  (Link to NCBI )
Experiment Title Metagenome from coral tissue
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name MX20_1_2
Library Layout SINGLE
Library Instrument ILLUMINA_HI_SEQ_4000
PROJECT COMPOSITION
Study Stony coral tissue microbial communities from Marine Reserve of Tabarca, Spain
Biosample Stony coral tissue microbial communities from Marine Reserve of Tabarca, Spain - MX20_1_2
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Stony coral tissue microbial communities from Marine Reserve of Tabarca, Spain - MX20_1_2
Other Names (alias, synonyms, short names)
  
Sample Description
Stony coral tissue microbial communities from Marine Reserve of Tabarca, Spain; In the presence of a Vibrio coculture growing inside a dialysis membrane under 20C for 10 days  
SAMPLE TAXONOMY
NCBI Taxonomy ID 496922
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Invertebrates  
Ecosystem Type
Cnidaria  
Ecosystem Subtype
Coral  
Specific Ecosystem
Tissue  

 

 

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