PROJECT INFORMATION
GOLD Project ID
Gp0585285  
Project Name
Lab enriched soil microbial communities from grassland in Hebei, Zhangjiakou, China - CMB5.2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bacteria related to tetracyclines and their epimers degradation
NCBI BioProject Accession PRJNA636829
NCBI Locus Tag
  
NCBI BioSample Accession SAMN15086933
PI
Added By JGI automated process on 2021-07-28
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Chinese Academy of Sciences (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Lab enriched soil microbial communities from grassland in Hebei, Zhangjiakou, China; amended with cow manure biochar soil spiked with tetracycline, chlortetracycline, and oxytetracycline, each at 150 mg per kg dry soil and incubated at 25C in the dark for 5 days  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX8456349  (Link to NCBI )
Experiment Title Bacterial community
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection PCR
Library Name CMB5.2
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Lab enriched soil microbial communities from grassland in Hebei, Zhangjiakou, China
Biosample Lab enriched soil microbial communities from grassland in Hebei, Zhangjiakou, China - CMB5.2
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Lab enriched soil microbial communities from grassland in Hebei, Zhangjiakou, China - CMB5.2
Other Names (alias, synonyms, short names)
  
Sample Description
Lab enriched soil microbial communities from grassland in Hebei, Zhangjiakou, China; amended with cow manure biochar soil spiked with tetracycline, chlortetracycline, and oxytetracycline, each at 150 mg per kg dry soil and incubated at 25C in the dark for 5 days  
SAMPLE TAXONOMY
NCBI Taxonomy ID 410658
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Grasslands  
Specific Ecosystem
Bulk soil  

 

 

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