PROJECT INFORMATION
GOLD Project ID
Gp0582671  
Project Name
Pig feces microbial communities from Edmonton, Canada - W0P183  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name 16S rRNA sequencing of swine fecal microbiota during the first three weeks after weaning
NCBI BioProject Accession PRJNA665253
NCBI Locus Tag
  
NCBI BioSample Accession SAMN16249408
PI
Added By JGI automated process on 2021-07-26
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center University of Alberta (Canada)
Collaborating Institute
  
Funding Agency
  
Project Description
Pig feces microbial communities from swine during the first three weeks after weaning, Edmonton, Canada  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX9184645  (Link to NCBI )
Experiment Title 16S_W0P183
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection PCR
Library Name 16S_W0P183
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Pig feces microbial communities from Edmonton, Canada
Biosample Pig feces microbial communities from Edmonton, Canada - W0P183
Analysis Projects
  
Number of Analysis Projects (AP) 0
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Pig feces microbial communities from Edmonton, Canada - W0P183
Other Names (alias, synonyms, short names)
  
Sample Description
Pig feces microbial communities from swine during the first three weeks after weaning, Edmonton, Canada  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1510822
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  

 

 

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