PROJECT INFORMATION
GOLD Project ID
Gp0569434  
Project Name
Exiguobacterium alkaliphilum B-3531D  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Exiguobacterium alkaliphilum strain:B-3531D
NCBI BioProject ID
NCBI BioProject Accession PRJNA721848
NCBI Locus Tag
KB235  
NCBI BioSample Accession SAMN18740301
PI yanina delegan
Added By yanina delegan on 2021-05-30
Last Modified By JGI automated process on 2021-06-09
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Scientific Cente
Collaborating Institute
  
Funding Agency Russian Foundation for Basic Research (RFBR) (Russia)
Project Description
Sustainable and Integrated Solutions for Monitoring and Remediation of Emerging Contaminants (organochlorine) from Non-Point Sources  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Exiguobacterium alkaliphilum B-3531D
Organism Exiguobacterium alkaliphilum B-3531D
Analysis Projects Exiguobacterium alkaliphilum B-3531D
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Contamination Screening Input
Reads  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Oxford Nanopore MinION
Library Method (MIGS-28)
  
Library Layout
Paired  
Library Screening Method
  
Number Of Reads
  
Read Size
300 bp  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0580549
Organism Name
Exiguobacterium alkaliphilum B-3531D  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Exiguobacterium  
Genus Synonyms
  
Species
Exiguobacterium alkaliphilum  
Subspecies
  
Species Synonyms
  
Strain
B-3531D  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1428684
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Bacilli  
NCBI Order
Bacillales  
NCBI Family
  
NCBI Genus
Exiguobacterium  
NCBI Species
Exiguobacterium alkaliphilum  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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