PROJECT INFORMATION | |||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GOLD Project ID
![]() |
Gp0551142
|
||||||||||||||||||||||||||||||||||||
Project Name
![]() |
Wolbachia endosymbiont TRS of Brugia malayi
|
||||||||||||||||||||||||||||||||||||
Other Names
![]() |
|
||||||||||||||||||||||||||||||||||||
Legacy GOLD ID
![]() |
|
||||||||||||||||||||||||||||||||||||
NCBI BioProject Name | Wolbachia sp | ||||||||||||||||||||||||||||||||||||
NCBI BioProject Accession
![]() |
PRJNA508212 |
||||||||||||||||||||||||||||||||||||
NCBI Locus Tag
![]() |
EJB10
|
||||||||||||||||||||||||||||||||||||
NCBI BioSample Accession
![]() |
SAMN10519683 |
||||||||||||||||||||||||||||||||||||
Source Sample ID
![]() |
|
||||||||||||||||||||||||||||||||||||
PI | Unknown | ||||||||||||||||||||||||||||||||||||
Added By | JGI automated process on 2021-03-12 | ||||||||||||||||||||||||||||||||||||
Last Modified By | JGI automated process on 2021-03-19 | ||||||||||||||||||||||||||||||||||||
Project Comments |
|
||||||||||||||||||||||||||||||||||||
Project Status
![]() |
Complete and Published
|
||||||||||||||||||||||||||||||||||||
Project Relevance
![]() |
Evolution |
||||||||||||||||||||||||||||||||||||
Sequencing Center
![]() |
New England Biolabs
(USA)
|
||||||||||||||||||||||||||||||||||||
Collaborating Institute
![]() |
|
||||||||||||||||||||||||||||||||||||
Funding Agency
![]() |
|
||||||||||||||||||||||||||||||||||||
Project Description
![]() |
Wolbachia endosymbiont TRS of Brugia malayi genome sequencing
|
||||||||||||||||||||||||||||||||||||
Is JGI Project |
No
|
||||||||||||||||||||||||||||||||||||
Project Information Visibility
![]() |
Public | ||||||||||||||||||||||||||||||||||||
PROJECT TYPE | |||||||||||||||||||||||||||||||||||||
Specimen
![]() |
Organism |
||||||||||||||||||||||||||||||||||||
Nucleic Acid
![]() |
DNA |
||||||||||||||||||||||||||||||||||||
Sequencing Strategy
![]() |
Whole Genome Sequencing
|
||||||||||||||||||||||||||||||||||||
EXTERNAL PROJECT LINKS | |||||||||||||||||||||||||||||||||||||
JGI Data Utilization Status
![]() |
|
||||||||||||||||||||||||||||||||||||
JGI Award DOI
![]() |
|
||||||||||||||||||||||||||||||||||||
Genome Publications
![]() |
Scientific reports: 9(1):5939 Large Enriched Fragment Targeted Sequencing (LEFT-SEQ) Applied to Capture of Wolbachia Genomes. PubMed: 30976027 DOI: 10.1038/s41598-019-42454-w |
||||||||||||||||||||||||||||||||||||
Other Publications
![]() |
|
||||||||||||||||||||||||||||||||||||
Ignored Publications
![]() |
|
||||||||||||||||||||||||||||||||||||
Unassigned Publications
![]() |
|
||||||||||||||||||||||||||||||||||||
SRA Experiment |
|
||||||||||||||||||||||||||||||||||||
PROJECT COMPOSITION | |||||||||||||||||||||||||||||||||||||
Study |
Wolbachia endosymbiont of Aedes albopictus wAlbB genome sequencing |
||||||||||||||||||||||||||||||||||||
Organism |
Wolbachia endosymbiont TRS of Brugia malayi |
||||||||||||||||||||||||||||||||||||
Analysis Projects |
Wolbachia endosymbiont TRS of Brugia malayi |
||||||||||||||||||||||||||||||||||||
Number of Analysis Projects (AP) |
1 |
||||||||||||||||||||||||||||||||||||
Number of Derived Analyis Projects (DAP) |
0
|
SEQUENCING INFORMATION | |
---|---|
Sequencing Status
![]() |
Complete |
Sequencing Quality (MIGS-31) |
Level 6: Finished |
Finishing Goal
![]() |
|
Contamination Screening Input
![]() |
|
DNA Amplification Method
![]() |
|
Single Cell Lysis Protocol
![]() |
|
Single Cell Lysis Approach
![]() |
|
Sequencing Comments
![]() |
|
DNA Amplification Kit
![]() |
|
Sequencing Technology
(MIGS-29)
![]() |
PacBio RSII |
Library Method
(MIGS-28)
![]() |
|
Library Layout
![]() |
|
Library Screening Method
![]() |
|
Number Of Reads
![]() |
|
Read Size
![]() |
|
Vector
![]() |
|
GC Percent |
|
Chromosome Count |
|
Plasmid Count |
|
ORGANISM NAME | |
---|---|
GOLD Organism ID |
Go0000498 |
Organism Name |
Wolbachia endosymbiont TRS of Brugia malayi
|
Other names (alias, synonyms, short names, common names) |
|
Organism Domain |
BACTERIAL
|
Phylogeny |
PROTEOBACTERIA-ALPHA
|
Genus |
Wolbachia
|
Genus Synonyms |
|
Species |
Wolbachia endosymbiont of Brugia malayi
|
Subspecies |
|
Species Synonyms |
|
Strain |
TRS
|
Strain Synonyms |
|
Serovar/Cultivar |
|
Culture Collection ID |
|
Type Strain |
Unknown
|
Exemplar DOI |
|
Exemplar Name |
|
Taxon DOI |
|
Biosafety Level |
|
Organism Comments |
|
Cultured |
Yes
|
Culture Type |
Isolate
|
Organism Type |
Natural
|
Uncultured Type |
|
Commercial Strain |
|
Commercial Strain Comments |
|
ORGANISM TAXONOMY
![]() |
|
NCBI Taxonomy ID |
292805 |
NCBI Superkingdom |
Bacteria
|
NCBI Kingdom |
|
NCBI Phylum |
Proteobacteria
|
NCBI Class |
Alphaproteobacteria
|
NCBI Order |
Rickettsiales
|
NCBI Family |
Anaplasmataceae
|
NCBI Genus |
Wolbachia
|
NCBI Species |
Wolbachia endosymbiont of Brugia malayi
|
ISOLATION CLASSIFICATION | |
Ecosystem |
Host-associated
|
Ecosystem Category |
Arthropoda: Insects
|
Ecosystem Type |
Unclassified
|
Ecosystem Subtype |
Unclassified
|
Specific Ecosystem |
Unclassified
|
ORGANISM EXTERNAL REFERENCES | |
Strain Info ID |
|
Genbank 16S ID |
|
GENERAL PROPERTIES | |
---|---|
Oxygen Requirement |
Aerobe
|
Cell Shape |
Coccus-shaped
|
Motility |
Nonmotile
|
Sporulation |
Nonsporulating
|
Temperature Range |
Mesophile
|
Salinity |
|
pH |
|
Cell Diameter |
|
Cell Length |
|
Color |
|
Gram Staining |
Gram-
|
Biotic Relationships | Symbiotic |
Symbiotic Physical Interaction |
Endosymbiotic intracellular
|
Symbiotic Relationship |
Parasitic
|
Symbiont Name |
Brugia malayi
|
Symbiont Taxon ID |
|
Cell Arrangements |
Singles |
Diseases |
None |
Known Habitats |
Host Endosymbiont Nematode endosymbiont |
Metabolisms |
|
Phenotypes |
|
Energy Sources |
|
You are going to add the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the SP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Checking that this Sequencing Project can be made private:
Do you want to continue with this visibility change?
Changing the SP Sequencing Strategy will also effect these items:
Do you want to continue with this Sequencing Strategy change?