PROJECT INFORMATION
GOLD Project ID
Gp0547082  
Project Name
Sporomusa termitida DSM 4440  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Sporomusa termitida
NCBI BioProject Accession PRJNA523110
NCBI Locus Tag
SPTER  
NCBI BioSample Accession SAMN10963686
PI
Added By JGI automated process on 2021-03-12
Last Modified By JGI automated process on 2021-03-12
Project Comments
  
Project Status
Complete and Published  
Project Relevance Industrial
Sequencing Center Goettingen Genomics Laboratory (Germany)
Georg-August University of Goettingen
Collaborating Institute
  
Funding Agency
  
Project Description
Sporomusa termitida DSM 4440 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX6578810  (Link to NCBI )
Experiment Title Sporomusa_termitida_Nanopore
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name STERn
Library Layout SINGLE
Library Instrument MIN_ION
 
SRA Experiment Id SRX6578809  (Link to NCBI )
Experiment Title Sporomusa_termitida
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name STER
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Sporomusa termitida DSM 4440
Organism Sporomusa termitida DSM 4440
Analysis Projects Sporomusa termitida DSM 4440
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0029291
Organism Name
Sporomusa termitida DSM 4440  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Sporomusa  
Genus Synonyms
  
Species
Sporomusa termitida  
Subspecies
  
Species Synonyms
  
Strain
DSM 4440  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 4440  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4440  
Exemplar Name
Sporomusa termitida  
Taxon DOI
10.1601/tx.4440  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2377
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Negativicutes  
NCBI Order
Selenomonadales  
NCBI Family
Sporomusaceae  
NCBI Genus
Sporomusa  
NCBI Species
Sporomusa termitida  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID HE582744
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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