PROJECT INFORMATION
GOLD Project ID
Gp0531627  
Project Name
Fecal microbial communities from an individual in Copenhagen, Denmark - MH0115  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Richness of human gut microbiome correlates with metabolic markers
NCBI BioProject ID 221837
NCBI BioProject Accession PRJEB4336
NCBI Locus Tag
  
NCBI BioSample Accession SAMEA2163248
PI
Added By JGI automated process on 2020-12-01
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Fecal microbial communities from an individual in Copenhagen, Denmark  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id ERX294512  (Link to NCBI )
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection other
Library Name 20091126L3
Library Layout PAIRED
Library Instrument ILLUMINA_GENOME_ANALYZER_I_IX
 
SRA Experiment Id ERX294510  (Link to NCBI )
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection other
Library Name 20091023
Library Layout PAIRED
Library Instrument ILLUMINA_GENOME_ANALYZER_I_IX
 
SRA Experiment Id ERX294511  (Link to NCBI )
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection other
Library Name 20091124L8
Library Layout PAIRED
Library Instrument ILLUMINA_GENOME_ANALYZER_I_IX
PROJECT COMPOSITION
Study Fecal microbial communities from individuals in Copenhagen, Denmark
Biosample Fecal microbial communities from an individual in Copenhagen, Denmark - MH0115
Analysis Projects Fecal microbial communities from an individual in Copenhagen, Denmark - MH0115
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Fecal microbial communities from an individual in Copenhagen, Denmark - MH0115
Other Names (alias, synonyms, short names)
  
Sample Description
Fecal microbial communities from an individual in Copenhagen, Denmark  
SAMPLE TAXONOMY
NCBI Taxonomy ID 408170
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  

 

 

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