PROJECT INFORMATION
GOLD Project ID
Gp0531155  
Project Name
Flower microbial communities from Verdon Regional Nature Park, France - RF1EM  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metagenome of the epithytic microbiota of Rosa x damascena flowers
NCBI BioProject ID 358465
NCBI BioProject Accession PRJNA358465
NCBI Locus Tag
  
NCBI BioSample Accession SAMN06174317
PI
Added By JGI automated process on 2020-12-01
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Agricultural
Sequencing Center University of Applied Sciences of Western Switzerland
Collaborating Institute
  
Funding Agency
  
Project Description
Flower epithytic microbial communities from Verdon Regional Nature Park, France  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2486772  (Link to NCBI )
Experiment Title Metagenome of Rose flower: external microbiome
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name RF1EM
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_1500
PROJECT COMPOSITION
Study Flower epithytic microbial communities from Verdon Regional Nature Park, France
Biosample Flower microbial communities from Verdon Regional Nature Park, France - RF1EM
Analysis Projects Flower microbial communities from Verdon Regional Nature Park, France - RF1EM
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Flower microbial communities from Verdon Regional Nature Park, France - RF1EM
Other Names (alias, synonyms, short names)
  
Sample Description
Flower epithytic microbial communities from Verdon Regional Nature Park, France  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1297885
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Phyllosphere  
Ecosystem Subtype
Anthosphere  
Specific Ecosystem
  

 

 

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