PROJECT INFORMATION
GOLD Project ID
Gp0514961  
Project Name
Freshwater viral communities from a reservoir in Singapore - point D, Mar 2017  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name wastewater metagenome
NCBI BioProject ID 438281
NCBI BioProject Accession PRJNA438281
NCBI Locus Tag
  
NCBI BioSample Accession SAMN08721811
PI
Added By JGI automated process on 2020-11-25
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center National University of Singapore (Singapore)
Collaborating Institute
  
Funding Agency
  
Project Description
Freshwater viral communities from various water reservoirs in Singapore  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3801851  (Link to NCBI )
Experiment Title Metagenomics sequencing of viruses in wastewater samples
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM PCR
Library Name point F, May 2017
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Freshwater viral communities from various water reservoirs in Singapore
Biosample Freshwater viral communities from a reservoir in Singapore - point D, Mar 2017
Organism
Analysis Projects Freshwater viral communities from a reservoir in Singapore - point D, Mar 2017
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Freshwater viral communities from a reservoir in Singapore - point D, Mar 2017
Other Names (alias, synonyms, short names)
  
Sample Description
Freshwater viral communities from various water reservoirs in Singapore  
SAMPLE TAXONOMY
NCBI Taxonomy ID 527639
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Reservoir  
Specific Ecosystem
  

 

 

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