PROJECT INFORMATION | |||||||||||||||||||||
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GOLD Project ID
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Gp0507539
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Project Name
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Soil microbial communities from forest in Santa Rita do Passa , Quatro, Sao Paulo, Brazil - FOR-W_2
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Other Names
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Legacy GOLD ID
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NCBI BioProject Name | Taxonomic and functional microbial profiles of sugarcane and forest soils in the tropical region | ||||||||||||||||||||
NCBI BioProject Accession
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PRJNA665014 |
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NCBI Locus Tag
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NCBI BioSample Accession
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SAMN16238505 |
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Source Sample ID
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PI | Unknown | ||||||||||||||||||||
Added By | JGI automated process on 2020-10-12 | ||||||||||||||||||||
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Project Comments |
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Project Status
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Permanent Draft
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Project Relevance
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Agricultural |
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Sequencing Center
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UNESP-FCAV
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Collaborating Institute
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Funding Agency
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Project Description
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Soil microbial communities from forest in Santa Rita do Passa , Quatro, Sao Paulo, Brazil during a wet period
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Is JGI Project |
No
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Project Information Visibility
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Public | ||||||||||||||||||||
PROJECT TYPE | |||||||||||||||||||||
Specimen
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Biome |
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Nucleic Acid
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DNA |
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Sequencing Strategy
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Metagenome
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EXTERNAL PROJECT LINKS | |||||||||||||||||||||
JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Other Publications
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Ignored Publications
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Unassigned Publications
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SRA Experiment |
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PROJECT COMPOSITION | |||||||||||||||||||||
Study |
Forest and sugarcane field soil microbial communities from Santa Rita do Passa , Quatro, Sao Paulo, Brazil |
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Biosample |
Soil microbial communities from forest in Santa Rita do Passa , Quatro, Sao Paulo, Brazil - FOR-W_2 |
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Analysis Projects |
Soil microbial communities from forest in Santa Rita do Passa , Quatro, Sao Paulo, Brazil - FOR-W_2 |
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Number of Analysis Projects (AP) |
1 |
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Number of Derived Analyis Projects (DAP) |
0
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SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
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Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Sorting Technology
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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Illumina HiScanSQ |
Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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GC Percent |
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Chromosome Count |
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Plasmid Count |
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SAMPLE NAME | |
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Sample Name |
Soil microbial communities from forest in Santa Rita do Passa , Quatro, Sao Paulo, Brazil - FOR-W_2 |
Other Names (alias, synonyms, short names) |
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Sample Description |
Soil microbial communities from forest in Santa Rita do Passa , Quatro, Sao Paulo, Brazil during a wet period
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SAMPLE TAXONOMY | |
NCBI Taxonomy ID |
410658 |
GOLD CLASSIFICATION | |
Ecosystem |
Environmental
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Ecosystem Category |
Terrestrial
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Ecosystem Type |
Soil
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Ecosystem Subtype |
Tropical forest
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Specific Ecosystem |
Bulk soil
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