PROJECT INFORMATION
GOLD Project ID
Gp0502478  
Project Name
Mollusc gills microbial communities from cold-seep, northern Gulf of Mexico, USA - H_c8.2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bathymodiolus brooksi
NCBI BioProject ID 508280
NCBI BioProject Accession PRJNA508280
NCBI Locus Tag
  
NCBI BioSample Accession SAMN10584496
PI
Added By JGI automated process on 2020-07-30
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Model Organism
Sequencing Center Christian-Albrechts University of Kiel
Collaborative Research Centre 1182 (CRC 1182)
Collaborating Institute
  
Funding Agency
  
Project Description
Mollusc gills microbial communities from cold-seep, northern Gulf of Mexico, USA  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5234779  (Link to NCBI )
Experiment Title shotgun metagenome: bathymodiolus brooksi specimen
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name H_c8.2
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Mollusc gills microbial communities from cold-seep, northern Gulf of Mexico, USA
Biosample Mollusc gills microbial communities from cold-seep, northern Gulf of Mexico, USA - H_c8.2
Analysis Projects Mollusc gills microbial communities from cold-seep, northern Gulf of Mexico, USA - H_c8.2
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Mollusc gills microbial communities from cold-seep, northern Gulf of Mexico, USA - H_c8.2
Other Names (alias, synonyms, short names)
  
Sample Description
Mollusc gills microbial communities from cold-seep, northern Gulf of Mexico, USA  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1455666
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mollusca  
Ecosystem Type
Respiratory system  
Ecosystem Subtype
Gills  
Specific Ecosystem
Intracellular  

 

 

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