PROJECT INFORMATION
GOLD Project ID
Gp0497168  
Project Name
Pontibacter sp. SGAir0037  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Pontibacter sp. SGAir0037 genome sequencing
NCBI BioProject ID 388547
NCBI BioProject Accession PRJNA388547
NCBI Locus Tag
C1N53  
NCBI BioSample Accession SAMN08222698
PI
Added By JGI automated process on 2020-07-06
Last Modified By JGI automated process on 2020-07-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Nanyang Technological University
Collaborating Institute
  
Funding Agency
  
Project Description
Pontibacter sp. SGAir0037 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5680519  (Link to NCBI )
Experiment Title Genome of Pontibacter actiniarum SGAir0037
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name LIB_000000000-APU31
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX5680521  (Link to NCBI )
Experiment Title Genome of Pontibacter actiniarum SGAir0037
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 160311_31-E01_1
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX5680520  (Link to NCBI )
Experiment Title Genome of Pontibacter actiniarum SGAir0037
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 161005_68-G01_1
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Bacillus altitudinis SGAir0031 genome sequencing
Organism Pontibacter sp. SGAir0037
Analysis Projects Pontibacter sp. SGAir0037
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio
Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0546233
Organism Name
Pontibacter sp. SGAir0037  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Pontibacter  
Genus Synonyms
  
Species
Pontibacter sp. SGAir0037  
Subspecies
  
Species Synonyms
  
Strain
SGAir0037  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2571030
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Hymenobacteraceae  
NCBI Genus
Pontibacter  
NCBI Species
Pontibacter sp. SGAir0037  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Air  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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