Studies
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52,218 |
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Biosamples
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170,232 |
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Sequencing Projects
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472,697 |
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Analysis Projects
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360,407 |
| Organisms | 460,470 |
| PROJECT INFORMATION | |||||||||||||||||||
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GOLD Project ID
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Gp0497165
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Project Name
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Citricoccus sp. SGAir0253
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Other Names
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Legacy GOLD ID
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| NCBI BioProject Name | Citricoccus sp. SGAir0253 genome sequencing | ||||||||||||||||||
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NCBI BioProject Accession
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PRJNA388547 |
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NCBI Locus Tag
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E7744
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NCBI BioSample Accession
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SAMN11388350 |
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| PI | |||||||||||||||||||
| Added By |
JGI automated process
on 2020-07-06 |
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| Last Modified By |
JGI automated process
on 2020-07-08 |
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| Project Comments |
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Project Status
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Complete and Published
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Project Relevance
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Environmental |
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Sequencing Center
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Nanyang Technological University
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Collaborating Institute
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Funding Agency
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Project Description
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Citricoccus sp. SGAir0253 genome sequencing
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| Is JGI Project |
No
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Project Information Visibility
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Public | ||||||||||||||||||
| PROJECT TYPE | |||||||||||||||||||
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Specimen
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Organism |
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Nucleic Acid
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DNA |
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Sequencing Strategy
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Whole Genome Sequencing
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| EXTERNAL PROJECT LINKS | |||||||||||||||||||
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JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Other Publications
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Ignored Publications
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Unassigned Publications
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Mycopathologia
185(3):591-594
Complete Genome Sequence of Penicillium oxalicum Strain SGAir0226 Isolated from Outdoor Tropical Air in Singapore.
Genome announcements Complete Genome Sequence of Type Strain SGAir0031 Isolated from Tropical Air Collected in Singapore. Show more publications...
Genome announcements
Complete Genome Sequence of Pseudomonas stutzeri Type Strain SGAir0442, Isolated from Singapore Air Samples.
Genome announcements Complete Genome Sequence of Staphylococcus haemolyticus Type Strain SGAir0252. Genome announcements Genome Sequence of Bacillus velezensis SGAir0473, Isolated from Tropical Air Collected in Singapore. Genome announcements Complete Genome Sequence of the Bacterium Serratia marcescens SGAir0764, Isolated from Singapore Air. Genome announcements Complete Genome Sequence of Acinetobacter indicus Type Strain SGAir0564 Isolated from Tropical Air Collected in Singapore. Genome announcements Genome Sequence of Pantoea ananatis SGAir0210, Isolated from Outdoor Air in Singapore. Genome announcements Genome Sequence of Geobacillus thermoleovorans SGAir0734, Isolated from Singapore Air. Genome announcements Complete Genome Sequence of Acinetobacter schindleri SGAir0122 Isolated from Singapore Air. Gut Pathog strain SGAir0282 isolated from air in Singapore. Genome announcements Complete Genome Sequence of Type Strain SGAir0187, Isolated from Tropical Air Collected in Singapore. |
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| SRA Experiment |
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| PROJECT COMPOSITION | |||||||||||||||||||
| Study |
Bacillus altitudinis SGAir0031 genome sequencing |
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| Organism |
Citricoccus sp. SGAir0253 |
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| Analysis Projects |
Citricoccus sp. SGAir0253 |
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| Number of Analysis Projects (AP) |
1 |
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| Number of Derived Analyis Projects (DAP) |
0
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| SEQUENCING INFORMATION | |
|---|---|
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Sequencing Status
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Complete |
| Sequencing Quality (MIGS-31) |
Level 6: Finished |
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Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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PacBio RSII |
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Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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| GC Percent |
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| Chromosome Count |
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| Plasmid Count |
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| ORGANISM NAME | |
|---|---|
| GOLD Organism ID |
Go0546230 |
| Organism Name |
Citricoccus sp. SGAir0253
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| Other names (alias, synonyms, short names, common names) |
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| Organism Domain |
BACTERIAL
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| Phylogeny |
ACTINOBACTERIA
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| Genus |
Citricoccus
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| Genus Synonyms |
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| Species |
Citricoccus sp. SGAir0253
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| Subspecies |
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| Species Synonyms |
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| Strain |
SGAir0253
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| Strain Synonyms |
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| Serovar/Cultivar |
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| Culture Collection ID |
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| Type Strain |
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| Exemplar DOI |
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| Exemplar Name |
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| Taxon DOI |
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| Biosafety Level |
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| Organism Comments |
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| Cultured |
Yes
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| Culture Type |
Isolate
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| Organism Type |
Natural
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| Uncultured Type |
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| Commercial Strain |
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| Commercial Strain Comments |
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ORGANISM TAXONOMY
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| NCBI Taxonomy ID |
2567881 |
| NCBI Superkingdom |
Bacteria
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| NCBI Kingdom |
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| NCBI Phylum |
Actinobacteria
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| NCBI Class |
Actinomycetia
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| NCBI Order |
Micrococcales
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| NCBI Family |
Micrococcaceae
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| NCBI Genus |
Citricoccus
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| NCBI Species |
Citricoccus sp. SGAir0253
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| ISOLATION CLASSIFICATION | |
| Ecosystem |
Environmental
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| Ecosystem Category |
Air
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| Ecosystem Type |
Unclassified
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| Ecosystem Subtype |
Unclassified
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| Specific Ecosystem |
Unclassified
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| ORGANISM EXTERNAL REFERENCES | |
| Strain Info ID |
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| Genbank 16S ID |
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| GENERAL PROPERTIES | |
|---|---|
| Oxygen Requirement |
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| Cell Shape |
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| Motility |
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| Sporulation |
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| Temperature Range |
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| Salinity |
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| pH |
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| Cell Diameter |
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| Cell Length |
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| Color |
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| Gram Staining |
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| Biotic Relationships |
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| Symbiotic Physical Interaction |
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| Symbiotic Relationship |
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| Symbiont Name |
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| Symbiont Taxon ID |
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| Cell Arrangements |
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| Diseases |
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| Known Habitats |
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| Metabolisms |
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| Phenotypes |
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| Energy Sources |
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