PROJECT INFORMATION
GOLD Project ID
Gp0496141  
Project Name
Similichlamydia epinepheli GCCT14  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Similichlamydia epinepheli GCCT14 genome sequencing
NCBI BioProject ID 343727
NCBI BioProject Accession PRJNA343727
NCBI Locus Tag
GCCT14  
NCBI BioSample Accession SAMN05792551
PI
Added By JGI automated process on 2020-07-06
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of the Sunshine Coast
Collaborating Institute
  
Funding Agency
  
Project Description
Similichlamydia epinepheli GCCT14 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Genome Publications Environmental microbiology 19(5):1899-1913 Culture-independent genomics of a novel chlamydial pathogen of fish provides new insight into host-specific adaptations utilized by these intracellular bacteria.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Similichlamydia epinepheli GCCT14 genome sequencing
Organism Similichlamydia epinepheli GCCT14
Analysis Projects Similichlamydia epinepheli GCCT14
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0545211
Organism Name
Similichlamydia epinepheli GCCT14  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
CHLAMYDIAE  
Genus
Similichlamydia  
Genus Synonyms
  
Species
Similichlamydia epinepheli  
Subspecies
  
Species Synonyms
  
Strain
GCCT14  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1903953
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Chlamydiae  
NCBI Class
Chlamydiia  
NCBI Order
Parachlamydiales  
NCBI Family
Candidatus Parilichlamydiaceae  
NCBI Genus
Candidatus Similichlamydia  
NCBI Species
Candidatus Similichlamydia epinepheli  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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