PROJECT INFORMATION
GOLD Project ID
Gp0495660  
Project Name
Larkinella terrae KCTC 52001  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Larkinella terrae KCTC 52001 genome sequencing
NCBI BioProject ID 588487
NCBI BioProject Accession PRJNA588487
NCBI Locus Tag
GJJ30  
NCBI BioSample Accession SAMN13245944
PI
Added By JGI automated process on 2020-07-06
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Huazhong Agricultural University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Larkinella terrae KCTC 52001 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Antonie van Leeuwenhoek 111(3):333-341 Larkinella terrae sp. nov., isolated from soil on Jeju Island, South Korea.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Larkinella terrae KCTC 52001 genome sequencing
Organism Larkinella terrae KCTC 52001
Analysis Projects Larkinella terrae KCTC 52001
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0544739
Organism Name
Larkinella terrae KCTC 52001  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Larkinella  
Genus Synonyms
  
Species
Larkinella terrae  
Subspecies
  
Species Synonyms
  
Strain
KCTC 52001  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KCTC 52001  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2025311
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
Cytophagaceae  
NCBI Genus
Larkinella  
NCBI Species
Larkinella terrae  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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