PROJECT INFORMATION
GOLD Project ID
Gp0492313  
Project Name
Bifidobacterium rousetti RST9  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bifidobacterium rousetti RST9 genome sequencing
NCBI BioProject ID 415181
NCBI BioProject Accession PRJNA415181
NCBI Locus Tag
CSQ85  
NCBI BioSample Accession SAMN07795375
PI
Added By JGI automated process on 2020-07-02
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Evolution
Sequencing Center University of Bologna
Collaborating Institute
  
Funding Agency
  
Project Description
Bifidobacterium rousetti RST9 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Bifidobacterium Genome sequencing
Organism Desulfovibrio sulfodismutans DSM 3696
Analysis Projects Bifidobacterium rousetti RST9
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0014035
Organism Name
Desulfovibrio sulfodismutans DSM 3696  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfovibrio  
Genus Synonyms
  
Species
Desulfovibrio sulfodismutans  
Subspecies
  
Species Synonyms
  
Strain
DSM 3696  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 3696  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3504  
Exemplar Name
Desulfovibrio sulfodismutans  
Taxon DOI
10.1601/tx.3504  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121464
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfovibrionales  
NCBI Family
Desulfovibrionaceae  
NCBI Genus
Desulfovibrio  
NCBI Species
Desulfovibrio sulfodismutans  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 121298
Genbank 16S ID Y17764
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Curved-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
6.8  
Cell Diameter
0.75 um  
Cell Length
2.5-3.5 um  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Mud
Aquatic
Fresh water
Metabolisms Sulfate reducer
Phenotypes
  
Energy Sources Chemoorganotroph

 

 

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