PROJECT INFORMATION
GOLD Project ID
Gp0491787  
Project Name
Rickettsia heilongjiangensis HCN-13  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Rickettsia heilongjiangensis HCN-13 genome sequencing
NCBI BioProject ID 591267
NCBI BioProject Accession PRJDB8002
NCBI Locus Tag
GOZ20  
NCBI BioSample Accession SAMD00161751
PI
Added By JGI automated process on 2020-07-02
Last Modified By JGI automated process on 2020-07-03
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center Kyushu University (Japan)
Collaborating Institute
  
Funding Agency
  
Project Description
Rickettsia heilongjiangensis HCN-13 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id DRX163892  (Link to NCBI )
Experiment Title Illumina MiSeq paired end sequencing of SAMD00161751
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Genome analysis of Rickettsia heilongjiangensis
Organism Rickettsia heilongjiangensis HCN-13
Analysis Projects Rickettsia heilongjiangensis HCN-13
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) illumina
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0540944
Organism Name
Rickettsia heilongjiangensis HCN-13  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Rickettsia  
Genus Synonyms
  
Species
Rickettsia heilongjiangensis  
Subspecies
  
Species Synonyms
  
Strain
HCN-13  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 226665
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rickettsiales  
NCBI Family
Rickettsiaceae  
NCBI Genus
Rickettsia  
NCBI Species
Rickettsia heilongjiangensis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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