PROJECT INFORMATION
GOLD Project ID
Gp0489741  
Project Name
Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb5  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Francis M. MARTIN
Added By JGI automated process on 2020-04-17
Last Modified By JGI automated process on 2020-05-08
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France; soil was collected in May outside brule, tree A  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Forest soil microbial communities from France, Sweden, Spain and USA, for metatranscriptomics studies
Biosample Soil fungal communities from truffle orchard in Rollainville, France - Anb5
Analysis Projects Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb5 (Eukaryote Community Metatranscriptome)
Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb5 (Eukaryote Community Metatranscriptome Expression - Self)
Number of Analysis Projects (AP)
2  
Number of Derived Analyis Projects (DAP)
1  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NovaSeq S4
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Soil fungal communities from truffle orchard in Rollainville, France - Anb5
Other Names (alias, synonyms, short names)
  
Sample Description
Soil fungal communities from truffle orchard in Rollainville, France; soil was collected in May outside brule, tree A  
SAMPLE TAXONOMY
NCBI Taxonomy ID 410658
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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