PROJECT INFORMATION
GOLD Project ID
Gp0489715  
Project Name
Veillonella sp. VA137  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Whole-Genome Sequence of Veillonella sp.
NCBI BioProject ID 506647
NCBI BioProject Accession PRJNA506647
NCBI Locus Tag
EO116  
NCBI BioSample Accession SAMN10465602
PI
Added By JGI automated process on 2020-04-15
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Institut Pasteur (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Whole-Genome Sequence of Veillonella sp.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX5189919  (Link to NCBI )
Experiment Title Whole genome of Veillonella sp from human clinical samples
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Veillonella 161-210
Library Layout PAIRED
Library Instrument NEXT_SEQ_500
PROJECT COMPOSITION
Study Whole-Genome Sequences of Veillonella sp. from human clinical samples and type strains of Veillonella validated species
Organism Veillonella sp. VA137
Analysis Projects Veillonella sp. VA137
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NextSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0538969
Organism Name
Veillonella sp. VA137  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Veillonella  
Genus Synonyms
  
Species
Veillonella sp. VA137  
Subspecies
  
Species Synonyms
  
Strain
VA137  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 741828
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Negativicutes  
NCBI Order
Veillonellales  
NCBI Family
Veillonellaceae  
NCBI Genus
Veillonella  
NCBI Species
Veillonella sp. VA137  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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