PROJECT INFORMATION
GOLD Project ID
Gp0484834  
Project Name
Cytomitobacter indipagum 1605  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Diplonemid endosymbionts
NCBI BioProject ID 556273
NCBI BioProject Accession PRJNA556273
NCBI Locus Tag
FZC35  
NCBI BioSample Accession SAMN12491243
PI
Added By JGI automated process on 2020-03-27
Last Modified By JGI automated process on 2020-03-30
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Sequencing Center University of British Columbia (Canada)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome of bacterial endosymbionts from diplonemids, an abundant and diverse heterotrophic protists.  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Bacterial endosymbionts of marine diplonemids
Organism Cytomitobacter indipagum 1605
Analysis Projects Cytomitobacter indipagum 1605
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0536175
Organism Name
Cytomitobacter indipagum 1605  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Cytomitobacter  
Genus Synonyms
  
Species
Cytomitobacter indipagum  
Subspecies
  
Species Synonyms
  
Strain
1605  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2601575
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Holosporales  
NCBI Family
Holosporaceae  
NCBI Genus
Candidatus Cytomitobacter  
NCBI Species
Candidatus Cytomitobacter indipagum  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Protists  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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