PROJECT INFORMATION
GOLD Project ID
Gp0480419  
Project Name
Kocuria massiliensis Marseille-P3598  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Kocuria sp. Marseille-P3598
NCBI BioProject Accession PRJEB20004
NCBI Locus Tag
B9Y51  
NCBI BioSample Accession SAMEA103911225
PI
Added By JGI automated process on 2020-03-16
Last Modified By Supratim Mukherjee on 2021-03-25
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Research Unit on Emerging Infectious and Tropical Diseases ( URMITE ) (France)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Kocuria massiliensis Marseille-P3598  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications Infection 46(2):259-262 Kocuria massiliensis sp. nov, a new bacterial species isolated from a patient with foot osteomyelitis.

Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Kocuria massiliensis genome
Organism Kocuria massiliensis Marseille-P3598
Analysis Projects Kocuria massiliensis Marseille-P3598
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0533499
Organism Name
Kocuria massiliensis Marseille-P3598  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Kocuria  
Genus Synonyms
  
Species
Kocuria massiliensis  
Subspecies
  
Species Synonyms
  
Strain
Marseille-P3598  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
Yes  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1926282
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinomycetia  
NCBI Order
Micrococcales  
NCBI Family
Micrococcaceae  
NCBI Genus
Kocuria  
NCBI Species
Kocuria massiliensis  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Mammals: Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Coccoid  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
Grey  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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