PROJECT INFORMATION
GOLD Project ID
Gp0479585  
Project Name
Microbial mat bacterial communities from Lunzer See, Austria - 20190426_36B  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Nicole Pietrasiak
Added By JGI automated process on 2020-02-14
Last Modified By JGI automated process on 2020-08-21
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Microbial mat bacterial communities from Lunzer See, Austria  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Terrestrial microbial communities from various environments and locations
Biosample Microbial mat bacterial communities from Lunzer See, Austria - 20190426_36B
Analysis Projects Microbial mat bacterial communities from Lunzer See, Austria - 20190426_36B
Microbial mat bacterial communities from Lunzer See, Austria - 20190426_36B
Microbial mat bacterial communities from Lunzer See, Austria - 20190426_36B
Number of Analysis Projects (AP)
3  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31) Level 3: Improved-High-Quality Draft
Finishing Goal Level 3: Improved-High-Quality Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio Sequel II
Illumina NovaSeq S4
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes; PacBio Multiplexed 3kb, Tubes  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Microbial mat bacterial communities from Lunzer See, Austria - 20190426_36B
Other Names (alias, synonyms, short names)
  
Sample Description
Microbial mat bacterial communities from Lunzer See, Austria  
SAMPLE TAXONOMY
NCBI Taxonomy ID 527640
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lake  
Specific Ecosystem
Microbial mats  

 

 

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