PROJECT INFORMATION
GOLD Project ID
Gp0477217  
Project Name
Tundra field soil microbial communities from Alaska Tundra, USA - AK5YR 4T 15-25cm  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name 4.5-year tundra warming experiment at the CiPEHR study site in Alaska
NCBI BioProject ID 533058
NCBI BioProject Accession PRJEB31848
NCBI Locus Tag
  
NCBI BioSample Accession SAMEA5534334
PI Kostas Konstantinidis
Added By JGI automated process on 2020-01-28
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Georgia Institute of Technology (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Tundra field soil microbial communities from Alaska Tundra, USA. Warmed soil sample  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id ERX3339159  (Link to NCBI )
Experiment Title Illumina HiSeq 2500 sequencing
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name Fence4_Warmed_15-25cm_May2013_Paired
Library Layout SINGLE
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Tundra field soil microbial communities from Alaska Tundra, USA
Biosample Tundra field soil microbial communities from Alaska Tundra, USA - AK5YR 4T 15-25cm
Analysis Projects Tundra field soil microbial communities from Alaska Tundra, USA - AK5YR 4T 15-25cm
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) ILLUMINA_HI_SEQ_2500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Tundra field soil microbial communities from Alaska Tundra, USA - AK5YR 4T 15-25cm
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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