PROJECT INFORMATION
GOLD Project ID
Gp0466126  
Project Name
Metatranscriptome of Soil microbial community from University of Lausanne, Switzerland - 13JONTOLA -ERS2957855  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metatranscriptome of Soil microbial community from University of Lausanne, Switzerland
NCBI BioProject ID 434982
NCBI BioProject Accession PRJEB22639
NCBI Locus Tag
  
NCBI BioSample Accession SAMEA5150113
PI
Added By JGI automated process on 2020-01-02
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of Lausanne
Collaborating Institute
  
Funding Agency
  
Project Description
Metatranscriptome of Soil microbial community from University of Lausanne, Switzerland  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id ERX2986593  (Link to NCBI )
Experiment Title Illumina HiSeq 2500 sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id ERX3158431  (Link to NCBI )
Experiment Title Illumina HiSeq 2500 sequencing
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name unspecified
Library Layout SINGLE
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Soil microbial community from University of Lausanne, Switzerland
Biosample Soil microbial community from University of Lausanne, Switzerland - 13JONTOLA -ERS2957855
Analysis Projects Metatranscriptome of Soil microbial community from University of Lausanne, Switzerland - 13JONTOLA -ERS2957855
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Soil microbial community from University of Lausanne, Switzerland - 13JONTOLA -ERS2957855
Other Names (alias, synonyms, short names)
  
Sample Description
Soil microbial community from University of Lausanne, Switzerland  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Clay  
Specific Ecosystem
  

 

 

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