PROJECT INFORMATION
GOLD Project ID
Gp0460406  
Project Name
Metatranscriptome of Marine bacterial community from Antarctica - 2013-2014-cruise  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metatranscriptome of Marine bacterial community from Antarctica
NCBI BioProject ID 327014
NCBI BioProject Accession PRJNA327014
NCBI Locus Tag
  
NCBI BioSample Accession SAMN05300427
PI
Added By JGI automated process on 2019-11-08
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Chungbuk National University (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Metatranscriptome of Marine bacterial community from Antarctica  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1887523  (Link to NCBI )
Experiment Title Transcriptional activity of Bacteria associated phytoplnakton bloom (peak phase) in Amundsen Sea Polynya
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection unspecified
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
PROJECT COMPOSITION
Study Marine bacterial community from Antarctica
Biosample Marine bacterial community from Antarctica - 2013-2014-cruise
Analysis Projects Metatranscriptome of Marine bacterial community from Antarctica - 2013-2014-cruise
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Marine bacterial community from Antarctica - 2013-2014-cruise
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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