PROJECT INFORMATION
GOLD Project ID
Gp0454627  
Project Name
Oerskovia sp. KBS0722  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Bacterial soil isolates
NCBI BioProject ID 539822
NCBI BioProject Accession PRJNA539822
NCBI Locus Tag
FFI11  
NCBI BioSample Accession SAMN11620953
PI
Added By JGI automated process on 2019-10-02
Last Modified By JGI automated process on 2019-10-04
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Sequencing Center Indiana University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing and assembly of bacteria from soil samples used in the long-term dormancy experiment  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX6798518  (Link to NCBI )
Experiment Title Illumina sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name KBS0722_illumina
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
 
SRA Experiment Id SRX6798519  (Link to NCBI )
Experiment Title Nanopore sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name KBS0722_nanopore_run2
Library Layout SINGLE
Library Instrument MIN_ION
PROJECT COMPOSITION
Study Genome sequencing and assembly of bacteria from soil samples used in the long-term dormancy experiment
Organism Oerskovia sp. KBS0722
Analysis Projects Oerskovia sp. KBS0722
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina HiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0527452
Organism Name
Oerskovia sp. KBS0722  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Oerskovia  
Genus Synonyms
  
Species
Oerskovia sp. KBS0722  
Subspecies
  
Species Synonyms
  
Strain
KBS0722  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KBS0722  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1179673
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Micrococcales  
NCBI Family
Cellulomonadaceae  
NCBI Genus
Oerskovia  
NCBI Species
Oerskovia sp. KBS0722  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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