PROJECT INFORMATION
GOLD Project ID
Gp0453831  
Project Name
Chryseobacterium lathyri KCTC 22544  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Chryseobacterium lathyri KCTC 22544
NCBI BioProject ID 478515
NCBI BioProject Accession PRJNA478515
NCBI Locus Tag
DRF61  
NCBI BioSample Accession SAMN09519149
PI Seung Bum Kim
Added By Jagadish Sundaramurthi on 2019-09-20
Last Modified By Supratim Mukherjee on 2019-09-23
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of the Free State
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Chryseobacterium lathyri KCTC 22544  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications Syst. Appl. Microbiol. 33(3):122-7 Four new species of Chryseobacterium from the rhizosphere of coastal sand dune plants, Chryseobacterium elymi sp. nov., Chryseobacterium hagamense sp. nov., Chryseobacterium lathyri sp. nov. and Chryseobacterium rhizosphaerae sp. nov.

SRA Experiment
 
SRA Experiment Id SRX5026294  (Link to NCBI )
Experiment Title Draft genome of Chryseobacterium lathyri KCTC 22544T
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name Clathyri
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study New species of Chryseobacterium from the rhizosphere of coastal sand dune plants
Organism Chryseobacterium lathyri KCTC 22544
Analysis Projects Chryseobacterium lathyri KCTC 22544
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0527119
Organism Name
Chryseobacterium lathyri KCTC 22544  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
Chryseobacterium  
Genus Synonyms
  
Species
Chryseobacterium lathyri  
Subspecies
  
Species Synonyms
  
Strain
KCTC 22544  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KCTC 22544  
Type Strain
Yes  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 395933
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Flavobacteriia  
NCBI Order
Flavobacteriales  
NCBI Family
Flavobacteriaceae  
NCBI Genus
Chryseobacterium  
NCBI Species
Chryseobacterium lathyri  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Rhizosphere  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Undefined  
Salinity
Undefined  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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