PROJECT INFORMATION
GOLD Project ID
Gp0452430  
Project Name
Neokomagataea sp. Ta1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Neokomagataea sp. Genome sequencing and assembly
NCBI BioProject ID 528182
NCBI BioProject Accession PRJNA528182
NCBI Locus Tag
E3203  
NCBI BioSample Accession SAMN11180614
PI Kah-Ooi Chua
Added By Kah-Ooi Chua on 2019-08-29
Last Modified By Galina Ovchinnikova on 2019-08-29
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center UNIVERSITY OF MALAYA
Collaborating Institute
  
Funding Agency
  
Project Description
Novel species isolated from Asian Weaver Ant, Oecophylla smaragdina  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Whole genome sequencing of Neokomagataea sp. Ta1
Organism Neokomagataea sp. Ta1
Analysis Projects Neokomagataea sp. Ta1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
High coverage  
Sequencing Technology (MIGS-29) PacBio Sequel
Illumina HiSeq
Library Method (MIGS-28)
PacBio 10kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
62  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0526522
Organism Name
Neokomagataea sp. Ta1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA  
Genus
Neokomagataea  
Genus Synonyms
  
Species
Neokomagataea sp. Ta1  
Subspecies
  
Species Synonyms
  
Strain
Ta1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 113642  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2558903
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Acetobacteraceae  
NCBI Genus
Neokomagataea  
NCBI Species
Neokomagataea sp. Ta1  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Insecta  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases
  
Known Habitats
  
Metabolisms Undefined
Phenotypes Acetic-acid
Energy Sources
  

 

 

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