PROJECT INFORMATION
GOLD Project ID
Gp0449685  
Project Name
Klebsiella pneumoniae pneumoniae ARLG-3135  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Klebsiella pneumoniae pneumoniae ARLG-3135 genome sequencing
NCBI BioProject ID 433394
NCBI BioProject Accession PRJNA433394
NCBI Locus Tag
EG819  
NCBI BioSample Accession SAMN10432823
PI
Added By JGI automated process on 2019-08-16
Last Modified By JGI automated process on 2019-08-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Medical
Sequencing Center J. Craig Venter Institute (JCVI) (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Klebsiella pneumoniae pneumoniae ARLG-3135 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX7405023  (Link to NCBI )
Experiment Title Other Sequencing of Klebsiella pneumoniae subsp. pneumoniae
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name ARLG-3135_Nextseq
Library Layout PAIRED
Library Instrument NEXT_SEQ_500
 
SRA Experiment Id SRX7405025  (Link to NCBI )
Experiment Title Other Sequencing of Klebsiella pneumoniae subsp. pneumoniae
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name ARLG-3135
Library Layout SINGLE
Library Instrument MIN_ION
PROJECT COMPOSITION
Study Klebsiella pneumoniae Genome sequencing and assembly - JCVI
Organism Klebsiella pneumoniae pneumoniae ARLG-3135
Analysis Projects Klebsiella pneumoniae pneumoniae ARLG-3135
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Oxford Nanopore
Illumina NextSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0525137
Organism Name
Klebsiella pneumoniae pneumoniae ARLG-3135  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Klebsiella  
Genus Synonyms
  
Species
Klebsiella pneumoniae  
Subspecies
pneumoniae  
Species Synonyms
  
Strain
ARLG-3135  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 72407
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacterales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Klebsiella  
NCBI Species
Klebsiella pneumoniae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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