PROJECT INFORMATION
GOLD Project ID
Gp0444361  
Project Name
Desulfovibrio carbinolicus DSM 3852  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Desulfovibrio carbinolicus DSM 3852 genome sequencing
NCBI BioProject ID 432440
NCBI BioProject Accession PRJNA432440
NCBI Locus Tag
C3Y92  
NCBI BioSample Accession SAMN08449371
PI
Added By JGI automated process on 2019-08-14
Last Modified By JGI automated process on 2019-08-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center California Institute of Technology (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Desulfovibrio carbinolicus DSM 3852 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Desulfovibrio carbinolicus DSM 3852 genome sequencing
Organism Desulfovibrio carbinolicus DSM 3852
Analysis Projects Desulfovibrio carbinolicus DSM 3852
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0026691
Organism Name
Desulfovibrio carbinolicus DSM 3852  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Desulfovibrio  
Genus Synonyms
  
Species
Desulfovibrio carbinolicus  
Subspecies
  
Species Synonyms
  
Strain
DSM 3852  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 3852  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3479  
Exemplar Name
Desulfovibrio carbinolicus  
Taxon DOI
10.1601/tx.3479  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 296842
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Desulfovibrionales  
NCBI Family
Desulfovibrionaceae  
NCBI Genus
Desulfovibrio  
NCBI Species
Desulfovibrio carbinolicus  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID AY626035
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Aquatic
Host
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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