PROJECT INFORMATION
GOLD Project ID
Gp0443878  
Project Name
Pyrenophora teres f. teres W1-1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Pyrenophora teres f. teres W1-1 genome sequencing
NCBI BioProject ID 390107
NCBI BioProject Accession PRJEB18107
NCBI Locus Tag
  
NCBI BioSample Accession SAMEA4560035
PI
Added By JGI automated process on 2019-08-14
Last Modified By
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center Curtin University
Collaborating Institute
  
Funding Agency
  
Project Description
Pyrenophora teres f. teres W1-1 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id ERX1812606
Experiment Title Illumina HiSeq 2000 sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2012
Library Layout SINGLE
Library Instrument ILLUMINA_HI_SEQ_2000
 
SRA Experiment Id ERX1812059
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812069
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2014-10-16
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812058
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812604
Experiment Title Illumina HiSeq 2000 paired end sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2012
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2000
 
SRA Experiment Id ERX1812062
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812061
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812064
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2014-10-16
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812063
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812066
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2014-10-16
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812065
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2014-10-16
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812057
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812068
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2014-10-16
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812056
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812067
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2014-10-16
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id ERX1812060
Experiment Title PacBio RS II sequencing
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name 2015-05-26
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Pyrenophora teres f. teres and Pyrenophora teres f. maculata reference genome assemblies.
Organism Pyrenophora teres f. teres W1-1
Analysis Projects
  
Number of Analysis Projects 0
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status In progress
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29)
  
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0519725
Organism Name
Pyrenophora teres f. teres W1-1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-ASCOMYCOTA  
Genus
Pyrenophora  
Genus Synonyms
  
Species
Pyrenophora teres  
Subspecies
  
Species Synonyms
  
Strain
W1-1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 97479
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Ascomycota  
NCBI Class
Dothideomycetes  
NCBI Order
Pleosporales  
NCBI Family
Pleosporaceae  
NCBI Genus
Pyrenophora  
NCBI Species
Pyrenophora teres  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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