PROJECT INFORMATION
GOLD Project ID
Gp0442757  
Project Name
Lysinimonas sp. 2DFWR-13  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Protaetiibacter intestinalis 2DFWR-13 genome sequencing
NCBI BioProject ID 493671
NCBI BioProject Accession PRJNA493671
NCBI Locus Tag
D7I47  
NCBI BioSample Accession SAMN10141032
PI
Added By JGI automated process on 2019-08-14
Last Modified By Supratim Mukherjee on 2020-12-27
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center National Institute of Agricultural Science
Collaborating Institute
  
Funding Agency
  
Project Description
Protaetiibacter intestinalis 2DFWR-13 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications International Journal of Systematic and Evolutionary Microbiology 69(7):2101-2107 Protaetiibacter intestinalis gen. nov., of the family Microbacteriaceae, isolated from gut of Protaetia brevitarsis seulensis, reclassification of Lysinimonas kribbensis Jang et al. 2013 as Pseudolysinimonas kribbensis gen. nov., comb. nov. and emended description of the genus Lysinimonas Jang et al. 2013.

Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Protaetiibacter intestinalis 2DFWR-13 genome sequencing
Organism Protaetiibacter intestinalis 2DFWR-13
Analysis Projects Lysinimonas sp. 2DFWR-13
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0518649
Organism Name
Protaetiibacter intestinalis 2DFWR-13  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Protaetiibacter  
Genus Synonyms
  
Species
Protaetiibacter intestinalis  
Subspecies
  
Species Synonyms
  
Strain
2DFWR-13  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KACC 19321  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2419774
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinobacteria  
NCBI Order
Micrococcales  
NCBI Family
Microbacteriaceae  
NCBI Genus
Protaetiibacter  
NCBI Species
Protaetiibacter intestinalis  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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