PROJECT INFORMATION
GOLD Project ID
Gp0441687  
Project Name
Haloterrigena jeotgali A29  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Haloterrigena jeotgali A29 genome sequencing
NCBI BioProject ID 482292
NCBI BioProject Accession PRJNA482292
NCBI Locus Tag
  
NCBI BioSample Accession SAMN09702595
PI
Added By JGI automated process on 2019-08-14
Last Modified By JGI automated process on 2019-08-20
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Wuhan University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Haloterrigena jeotgali A29 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications Nature communications 10(1):1688 A new type of DNA phosphorothioation-based antiviral system in archaea.

Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX4791021
Experiment Title SMRT-seq of A29
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection size fractionation
Library Name A01_140
Library Layout PAIRED
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Haloterrigena jeotgali A29 genome sequencing
Organism Haloterrigena jeotgali A29
Analysis Projects Haloterrigena jeotgali A29
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0086822
Organism Name
Haloterrigena jeotgali A29  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Haloterrigena  
Genus Synonyms
  
Species
Haloterrigena jeotgali  
Subspecies
  
Species Synonyms
  
Strain
A29  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 18794  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14600  
Exemplar Name
Haloterrigena jeotgali  
Taxon DOI
10.1601/tx.14600  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1455609
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Natrialbales  
NCBI Family
Natrialbaceae  
NCBI Genus
Haloterrigena  
NCBI Species
Haloterrigena jeotgali  
ISOLATION CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Food production  
Ecosystem Type
Fermented seafood  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID EF077633
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Salinity
Halotolerant  
pH
7.0–7.5  
Cell Diameter
0.4 μm  
Cell Length
1.0 μm  
Color
Red  
Gram Staining
Gram-  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Irregular colonies
Diseases
  
Known Habitats Fermented food product
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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